RNA FRABASE 3: an engine with database to search the three-dimensional fragments within 3D RNA structures using as an input the sequence(s) and / or secondary structure(s) given in the dot-bracket notation.

Sequence(s) and / or secondary structure(s)

#tRNA(Phe), yeast (Saccharomyces Scerevisiae) >strand1 gCGGAUUUAgCUCAGuuGGGAGAGCgCCAGAcUgAAgAucUGGAGgUCcUGUGuuCGaUCCACAGAAUUCGCACCA

Parameters

Experimental method:

X-Ray NMR Electron Microscopy Other

At least one method must be selected

Include all models of the structure:

Case sensitive (modified residues sensitive search):

Add through-space interactions:

Strand shift operation:

Resolution:

≤    Å

Search